STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ00584.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)    
Predicted Functional Partners:
KQZ00635.1
2,5-didehydrogluconate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
0.767
KQZ00636.1
2,5-didehydrogluconate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
0.767
KQZ02479.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.726
KQZ00127.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
0.719
KQZ02332.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.552
KQY99496.1
Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.515
KQY97956.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.512
KQZ00586.1
Ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.497
KQZ00587.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.490
KQY98314.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.479
Your Current Organism:
Pseudolabrys sp. Root1462
NCBI taxonomy Id: 1736466
Other names: P. sp. Root1462
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.