STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ00731.1Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)    
Predicted Functional Partners:
KQZ02456.1
FeS assembly SUF system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.792
KQZ00729.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.596
KQZ00730.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
       0.587
sufC
Fe-S cluster assembly ATPase SufC; Part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.585
KQZ00732.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.
       0.559
KQZ00726.1
Fe-S cluster assembly protein SufB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.517
KQZ00727.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.510
KQZ00733.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.509
KQY98482.1
Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.454
KQZ02605.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.437
Your Current Organism:
Pseudolabrys sp. Root1462
NCBI taxonomy Id: 1736466
Other names: P. sp. Root1462
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.