STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ01459.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (196 aa)    
Predicted Functional Partners:
KQZ01457.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.866
KQZ01460.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KQZ01470.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.758
KQZ01472.1
4-hydroxyphenylacetate 3-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.692
KQZ01455.1
4-hydroxyphenylacetate 3-hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.656
KQZ02543.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.633
KQZ02542.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.619
KQZ01458.1
Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.475
KQZ00083.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.469
KQZ02544.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.
       0.466
Your Current Organism:
Pseudolabrys sp. Root1462
NCBI taxonomy Id: 1736466
Other names: P. sp. Root1462
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.