STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ02246.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)    
Predicted Functional Partners:
ASD45_09470
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.876
KQZ02300.1
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.769
KQZ02371.1
Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
   
 0.763
KQZ01745.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.762
ASD45_17650
Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.636
KQZ01154.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.634
KQY98224.1
Integrase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.633
KQZ02479.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 0.631
KQZ00587.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.584
KQZ01069.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.583
Your Current Organism:
Pseudolabrys sp. Root1462
NCBI taxonomy Id: 1736466
Other names: P. sp. Root1462
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