STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQY98070.1Gluconate 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)    
Predicted Functional Partners:
KQY98069.1
GMC family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.994
KQY98437.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.948
KQZ00569.1
Phosphomannomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.699
KQZ02432.1
Phosphomannomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.696
KQY99842.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.681
ASD45_14015
Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.669
KQZ00180.1
Alkylated DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.664
KQY97720.1
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.600
KQZ01944.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.585
proB
Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
       0.562
Your Current Organism:
Pseudolabrys sp. Root1462
NCBI taxonomy Id: 1736466
Other names: P. sp. Root1462
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.