STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ16022.123S rRNA (adenine(2503)-C2)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (410 aa)    
Predicted Functional Partners:
KQZ14844.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.715
KQZ12711.1
Coproporphyrinogen III oxidase; Catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.705
KQZ12760.1
(dimethylallyl)adenosine tRNA methylthiotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.704
KQZ15719.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.679
KQZ14992.1
2-methylthioadenine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.655
KQZ16079.1
methionyl-tRNA formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.644
KQZ15142.1
Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.630
KQZ13306.1
Antitermination protein NusB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.616
KQZ16021.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.610
KQZ14705.1
Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.609
Your Current Organism:
Mesorhizobium sp. Root1471
NCBI taxonomy Id: 1736469
Other names: M. sp. Root1471
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.