STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ32621.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (586 aa)    
Predicted Functional Partners:
KQZ45324.1
Chloroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.787
KQZ27579.1
Chloroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.787
KQZ27580.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.779
KQZ32622.1
Polyisoprenoid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0312 family.
       0.773
KQZ42239.1
Nicotinamidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.726
KQZ27803.1
DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.640
KQZ27582.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.569
ssuB
Aliphatic sulfonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
       0.497
KQZ32624.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.496
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
       0.496
Your Current Organism:
Duganella sp. Root1480D1
NCBI taxonomy Id: 1736471
Other names: D. sp. Root1480D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.