STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ66009.1Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)    
Predicted Functional Partners:
KQZ65584.1
DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.879
KQZ64667.1
ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.823
KQZ64666.1
DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.801
KQZ65633.1
Transcription elongation factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.584
KQZ66008.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.581
KQZ65585.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.473
KQZ62763.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.465
KQZ61224.1
Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.436
KQZ61225.1
Damage-inducible mutagenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.435
KQZ65788.1
Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.411
Your Current Organism:
Sphingopyxis sp. Root1497
NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.