STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ65636.1Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (88 aa)    
Predicted Functional Partners:
KQZ65635.1
Iron transporter FeoB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.992
KQZ65634.1
Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.798
KQZ65637.1
RpsU-divergently transcribed; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.778
KQZ66015.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.761
KQZ65633.1
Transcription elongation factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.666
KQZ65638.1
Alkene reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.474
KQZ63980.1
Cystathionine beta-lyase; Catalyzes the formation of L-homocysteine from cystathionine; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.431
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.418
Your Current Organism:
Sphingopyxis sp. Root1497
NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.