STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ66030.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)    
Predicted Functional Partners:
KQZ65750.1
long-chain-fatty-acyl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.960
KQZ65757.1
long-chain-fatty-acyl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.861
KQZ65753.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.724
KQZ65752.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.722
KQZ65751.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.718
KQZ61793.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.643
KQZ61486.1
Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.632
KQZ63907.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.578
KQZ61097.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.570
KQZ65748.1
2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.555
Your Current Organism:
Sphingopyxis sp. Root1497
NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.