STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ65783.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (469 aa)    
Predicted Functional Partners:
KQZ65784.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.968
KQZ65785.1
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.965
KQZ64215.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.865
KQZ64214.1
Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.848
KQZ61835.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.827
KQZ61836.1
Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.809
KQZ64931.1
Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.726
KQZ63775.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.712
KQZ65203.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.703
KQZ63926.1
Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.680
Your Current Organism:
Sphingopyxis sp. Root1497
NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.