STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ65862.1Osmotically inducible protein OsmC; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)    
Predicted Functional Partners:
KQZ65905.1
DNA starvation/stationary phase protection protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.
  
  
 0.569
KQZ64662.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.552
KQZ61843.1
PAS sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.511
KQZ62552.1
Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.502
KQZ62663.1
General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.
   
  
 0.497
KQZ65861.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.489
ASD67_18060
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.478
KQZ62422.1
Dihydropteridine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the globin family.
     
 0.434
Your Current Organism:
Sphingopyxis sp. Root1497
NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.