STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ65350.1Phasin; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)    
Predicted Functional Partners:
KQZ65349.1
poly(R)-hydroxyalkanoic acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.807
KQZ62506.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.640
KQZ65888.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.636
clpS
ATP-dependent Clp protease adaptor ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
       0.635
KQZ64777.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.633
KQZ62617.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.601
KQZ65704.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.587
KQZ61837.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.578
KQZ64830.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.572
KQZ65348.1
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.569
Your Current Organism:
Sphingopyxis sp. Root1497
NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.