STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ63837.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)    
Predicted Functional Partners:
KQZ63926.1
Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.793
KQZ63775.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.778
KQZ65203.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.763
KQZ64931.1
Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.735
ASD67_04610
Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.648
KQZ65057.1
1,2-oxophytodienoate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.602
ndk
Phosphodiesterase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
 
  
  0.556
KQZ63838.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.537
KQZ63839.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.503
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
     
 0.488
Your Current Organism:
Sphingopyxis sp. Root1497
NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.