STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ64254.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)    
Predicted Functional Partners:
KQZ61986.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.875
KQZ61107.1
DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.827
KQZ64253.1
Carboxymethylenebutenolidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.774
KQZ65116.1
Shikimate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KQZ64255.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.658
KQZ65332.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.653
KQZ63969.1
acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.456
KQZ64420.1
acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.456
KQZ63990.1
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.445
KQZ64256.1
Peptidase S1; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.445
Your Current Organism:
Sphingopyxis sp. Root1497
NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.