STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ64469.1GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)    
Predicted Functional Partners:
ispDF
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF).
    
  0.635
KQZ64468.1
Dihydroneopterin aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.625
KQZ64467.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.618
KQZ64470.1
Proteophosphoglycan precursor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.595
KQZ64471.1
NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.595
KQZ64472.1
Polynucleotide adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.595
KQZ64001.1
Arylsulfate sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.506
KQZ61888.1
ATP synthase I; A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex.
  
     0.496
KQZ60922.1
Cytochrome c biogenesis factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.452
KQZ65458.1
Fe-S cluster protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.437
Your Current Organism:
Sphingopyxis sp. Root1497
NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497
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