KQZ64892.1 protein (Sphingopyxis sp. Root1497)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

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Textmining

[Homology]

Score

KQZ64892.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)

Predicted Functional Partners:

KQZ64165.1

0.973

KQZ61562.1

0.871

KQZ60759.1

0.868

ASD67_09990

0.856

KQZ61838.1

0.841

KQZ61839.1

0.837

KQZ64897.1

0.683

KQZ61046.1

0.668

KQZ64761.1

0.660

KQZ62707.1

0.644

Your Current Organism:

Sphingopyxis sp. Root1497

NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASD67_09990	KQZ60759.1	ASD67_09990	ASD67_15745	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.848
ASD67_09990	KQZ61046.1	ASD67_09990	ASD67_17355	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.638
ASD67_09990	KQZ61562.1	ASD67_09990	ASD67_20355	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.844
ASD67_09990	KQZ61838.1	ASD67_09990	ASD67_21995	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.844
ASD67_09990	KQZ62707.1	ASD67_09990	ASD67_14480	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.605
ASD67_09990	KQZ64165.1	ASD67_09990	ASD67_06570	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.729
ASD67_09990	KQZ64761.1	ASD67_09990	ASD67_09995	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.946
ASD67_09990	KQZ64892.1	ASD67_09990	ASD67_10790	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.856
ASD67_09990	KQZ64897.1	ASD67_09990	ASD67_10820	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.550
KQZ60759.1	ASD67_09990	ASD67_15745	ASD67_09990	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.848
KQZ60759.1	KQZ61839.1	ASD67_15745	ASD67_22000	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	Iron dicitrate transport regulator FecR; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.870
KQZ60759.1	KQZ62707.1	ASD67_15745	ASD67_14480	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.588
KQZ60759.1	KQZ64165.1	ASD67_15745	ASD67_06570	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.584
KQZ60759.1	KQZ64761.1	ASD67_15745	ASD67_09995	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.770
KQZ60759.1	KQZ64892.1	ASD67_15745	ASD67_10790	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.868
KQZ61046.1	ASD67_09990	ASD67_17355	ASD67_09990	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.638
KQZ61046.1	KQZ61839.1	ASD67_17355	ASD67_22000	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron dicitrate transport regulator FecR; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.610
KQZ61046.1	KQZ62707.1	ASD67_17355	ASD67_14480	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.584
KQZ61046.1	KQZ64892.1	ASD67_17355	ASD67_10790	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.668
KQZ61562.1	ASD67_09990	ASD67_20355	ASD67_09990	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.844