STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ64931.1Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)    
Predicted Functional Partners:
KQZ64930.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.972
KQZ64932.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.958
KQZ64857.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.
 
 
 0.856
emrB
Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.
 
 
 0.851
KQZ63925.1
Disulfide bond formation protein DsbA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.
 
 
 0.841
KQZ63776.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.777
KQZ63837.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.735
KQZ65783.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.726
KQZ61834.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.715
KQZ64216.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.712
Your Current Organism:
Sphingopyxis sp. Root1497
NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.