STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ64952.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (505 aa)    
Predicted Functional Partners:
KQZ61886.1
ATP synthase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
KQZ66018.1
Stilbene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.975
ASD67_11145
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.964
KQZ65217.1
FemAB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.964
KQZ64951.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.964
KQZ64953.1
Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.925
KQZ64948.1
Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.849
KQZ64949.1
Chain-length determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.849
KQZ65215.1
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.849
KQZ61107.1
DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.839
Your Current Organism:
Sphingopyxis sp. Root1497
NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.