KQZ62347.1 protein (Sphingopyxis sp. Root1497)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

KQZ62347.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa)

Predicted Functional Partners:

KQZ62348.1

0.955

KQZ62350.1

0.882

KQZ63843.1

0.853

KQZ62340.1

0.828

KQZ60579.1

0.771

KQZ65744.1

0.768

KQZ64012.1

0.768

KQZ61282.1

0.762

KQZ61258.1

0.757

KQZ62314.1

0.743

Your Current Organism:

Sphingopyxis sp. Root1497

NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KQZ60579.1	KQZ62347.1	ASD67_14745	ASD67_12405	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.771
KQZ61258.1	KQZ62347.1	ASD67_18615	ASD67_12405	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.757
KQZ61282.1	KQZ62347.1	ASD67_18745	ASD67_12405	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
KQZ62314.1	KQZ62347.1	ASD67_12240	ASD67_12405	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.743
KQZ62314.1	KQZ64012.1	ASD67_12240	ASD67_05665	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.761
KQZ62340.1	KQZ62347.1	ASD67_12370	ASD67_12405	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.828
KQZ62347.1	KQZ60579.1	ASD67_12405	ASD67_14745	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.771
KQZ62347.1	KQZ61258.1	ASD67_12405	ASD67_18615	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.757
KQZ62347.1	KQZ61282.1	ASD67_12405	ASD67_18745	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
KQZ62347.1	KQZ62314.1	ASD67_12405	ASD67_12240	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.743
KQZ62347.1	KQZ62340.1	ASD67_12405	ASD67_12370	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.828
KQZ62347.1	KQZ62348.1	ASD67_12405	ASD67_12410	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.955
KQZ62347.1	KQZ62350.1	ASD67_12405	ASD67_12420	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.882
KQZ62347.1	KQZ63843.1	ASD67_12405	ASD67_04650	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
KQZ62347.1	KQZ64012.1	ASD67_12405	ASD67_05665	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.768
KQZ62347.1	KQZ65744.1	ASD67_12405	ASD67_01170	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.768
KQZ62348.1	KQZ62347.1	ASD67_12410	ASD67_12405	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.955
KQZ62348.1	KQZ62350.1	ASD67_12410	ASD67_12420	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.496
KQZ62350.1	KQZ62347.1	ASD67_12420	ASD67_12405	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.882
KQZ62350.1	KQZ62348.1	ASD67_12420	ASD67_12410	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.496