STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ62601.1Acetylpolyamine aminohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)    
Predicted Functional Partners:
KQZ60692.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.983
KQZ62024.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.983
cobB
NAD-dependent deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sirtuin family. Class III subfamily.
    
 
 0.941
KQZ62071.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family.
 
 
 0.834
KQZ64125.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family.
   
 0.813
KQZ61371.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.813
ASD67_18060
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.781
smc
Chromosome segregation protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
 0.726
KQZ61732.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.726
KQZ60904.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.716
Your Current Organism:
Sphingopyxis sp. Root1497
NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.