STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ60757.1DNA alkylation repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)    
Predicted Functional Partners:
KQZ60758.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KQZ60759.1
RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.
       0.613
KQZ60760.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.613
KQZ60756.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.485
KQZ61944.1
Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.
       0.405
KQZ60761.1
Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.405
KQZ60762.1
Capsule biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.405
KQZ60763.1
Capsule biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.405
KQZ60764.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.405
KQZ60765.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.405
Your Current Organism:
Sphingopyxis sp. Root1497
NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.