STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ61950.1Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)    
Predicted Functional Partners:
KQZ61843.1
PAS sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.980
KQZ60880.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.843
KQZ65623.1
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.832
KQZ64709.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.823
KQZ61137.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.762
KQZ61154.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.762
KQZ61156.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.762
KQZ61157.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.762
KQZ60825.1
Flagellar motor stator protein MotA; With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.729
KQZ61759.1
PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.722
Your Current Organism:
Sphingopyxis sp. Root1497
NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497
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