STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ61230.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (83 aa)    
Predicted Functional Partners:
KQZ61994.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.928
KQZ61231.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.927
KQZ61232.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.927
KQZ61233.1
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.854
KQZ61235.1
CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.830
KQZ61234.1
Conjugal transfer protein TraG; Type IV secretion VirD4 coupling protein family; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.817
KQZ65205.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.794
KQZ61243.1
Conjugal transfer protein TrbJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
KQZ61229.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.770
KQZ61241.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.766
Your Current Organism:
Sphingopyxis sp. Root1497
NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.