KQZ61249.1 protein (Sphingopyxis sp. Root1497)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

KQZ61249.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)

Predicted Functional Partners:

KQZ61250.1

0.774

KQZ65421.1

0.487

KQZ64637.1

0.481

KQZ61399.1

0.425

KQZ65400.1

0.424

KQZ63696.1

0.402

Your Current Organism:

Sphingopyxis sp. Root1497

NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KQZ61249.1	KQZ61250.1	ASD67_18550	ASD67_18555	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.774
KQZ61249.1	KQZ61399.1	ASD67_18550	ASD67_19425	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.425
KQZ61249.1	KQZ63696.1	ASD67_18550	ASD67_03840	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.402
KQZ61249.1	KQZ64637.1	ASD67_18550	ASD67_09295	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.481
KQZ61249.1	KQZ65400.1	ASD67_18550	ASD67_03080	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.424
KQZ61249.1	KQZ65421.1	ASD67_18550	ASD67_03190	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.487
KQZ61250.1	KQZ61249.1	ASD67_18555	ASD67_18550	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.774
KQZ61399.1	KQZ61249.1	ASD67_19425	ASD67_18550	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.425
KQZ61399.1	KQZ63696.1	ASD67_19425	ASD67_03840	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.702
KQZ61399.1	KQZ64637.1	ASD67_19425	ASD67_09295	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.774
KQZ61399.1	KQZ65400.1	ASD67_19425	ASD67_03080	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.774
KQZ61399.1	KQZ65421.1	ASD67_19425	ASD67_03190	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.737
KQZ63696.1	KQZ61249.1	ASD67_03840	ASD67_18550	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.402
KQZ63696.1	KQZ61399.1	ASD67_03840	ASD67_19425	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.702
KQZ63696.1	KQZ64637.1	ASD67_03840	ASD67_09295	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.709
KQZ63696.1	KQZ65400.1	ASD67_03840	ASD67_03080	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.798
KQZ63696.1	KQZ65421.1	ASD67_03840	ASD67_03190	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.560
KQZ64637.1	KQZ61249.1	ASD67_09295	ASD67_18550	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.481
KQZ64637.1	KQZ61399.1	ASD67_09295	ASD67_19425	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.774
KQZ64637.1	KQZ63696.1	ASD67_09295	ASD67_03840	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.709