KQZ61373.1 protein (Sphingopyxis sp. Root1497)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

KQZ61373.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1172 aa)

Predicted Functional Partners:

KQZ61367.1

0.960

KQZ61379.1

0.956

KQZ61375.1

0.955

KQZ61376.1

0.955

KQZ61366.1

0.949

KQZ61368.1

0.946

KQZ61370.1

0.946

KQZ61371.1

0.946

KQZ61374.1

0.946

KQZ61377.1

0.945

Your Current Organism:

Sphingopyxis sp. Root1497

NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KQZ61366.1	KQZ61367.1	ASD67_19250	ASD67_19255	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KQZ61366.1	KQZ61368.1	ASD67_19250	ASD67_19260	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.935
KQZ61366.1	KQZ61370.1	ASD67_19250	ASD67_19270	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.935
KQZ61366.1	KQZ61371.1	ASD67_19250	ASD67_19275	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.936
KQZ61366.1	KQZ61373.1	ASD67_19250	ASD67_19285	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.949
KQZ61366.1	KQZ61374.1	ASD67_19250	ASD67_19290	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.935
KQZ61366.1	KQZ61375.1	ASD67_19250	ASD67_19295	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KQZ61366.1	KQZ61376.1	ASD67_19250	ASD67_19300	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
KQZ61366.1	KQZ61377.1	ASD67_19250	ASD67_19305	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.933
KQZ61366.1	KQZ61379.1	ASD67_19250	ASD67_19315	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQZ61367.1	KQZ61366.1	ASD67_19255	ASD67_19250	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KQZ61367.1	KQZ61368.1	ASD67_19255	ASD67_19260	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
KQZ61367.1	KQZ61370.1	ASD67_19255	ASD67_19270	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
KQZ61367.1	KQZ61371.1	ASD67_19255	ASD67_19275	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.948
KQZ61367.1	KQZ61373.1	ASD67_19255	ASD67_19285	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.960
KQZ61367.1	KQZ61374.1	ASD67_19255	ASD67_19290	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
KQZ61367.1	KQZ61375.1	ASD67_19255	ASD67_19295	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
KQZ61367.1	KQZ61376.1	ASD67_19255	ASD67_19300	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KQZ61367.1	KQZ61377.1	ASD67_19255	ASD67_19305	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957
KQZ61367.1	KQZ61379.1	ASD67_19255	ASD67_19315	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997