KQZ61383.1 protein (Sphingopyxis sp. Root1497)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

KQZ61383.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (751 aa)

Predicted Functional Partners:

KQZ61381.1

0.949

KQZ61382.1

0.949

KQZ61384.1

0.948

KQZ63688.1

0.801

KQZ61367.1

0.801

KQZ61368.1

0.801

KQZ61370.1

0.801

KQZ61374.1

0.801

KQZ61375.1

0.801

KQZ61376.1

0.801

Your Current Organism:

Sphingopyxis sp. Root1497

NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KQZ61367.1	KQZ61368.1	ASD67_19255	ASD67_19260	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
KQZ61367.1	KQZ61370.1	ASD67_19255	ASD67_19270	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
KQZ61367.1	KQZ61374.1	ASD67_19255	ASD67_19290	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
KQZ61367.1	KQZ61375.1	ASD67_19255	ASD67_19295	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
KQZ61367.1	KQZ61376.1	ASD67_19255	ASD67_19300	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KQZ61367.1	KQZ61381.1	ASD67_19255	ASD67_19325	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
KQZ61367.1	KQZ61382.1	ASD67_19255	ASD67_19330	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
KQZ61367.1	KQZ61383.1	ASD67_19255	ASD67_19335	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.801
KQZ61367.1	KQZ61384.1	ASD67_19255	ASD67_19340	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.801
KQZ61367.1	KQZ63688.1	ASD67_19255	ASD67_03800	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.801
KQZ61368.1	KQZ61367.1	ASD67_19260	ASD67_19255	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
KQZ61368.1	KQZ61370.1	ASD67_19260	ASD67_19270	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
KQZ61368.1	KQZ61374.1	ASD67_19260	ASD67_19290	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
KQZ61368.1	KQZ61375.1	ASD67_19260	ASD67_19295	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.946
KQZ61368.1	KQZ61376.1	ASD67_19260	ASD67_19300	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.946
KQZ61368.1	KQZ61381.1	ASD67_19260	ASD67_19325	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.801
KQZ61368.1	KQZ61382.1	ASD67_19260	ASD67_19330	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.801
KQZ61368.1	KQZ61383.1	ASD67_19260	ASD67_19335	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.801
KQZ61368.1	KQZ61384.1	ASD67_19260	ASD67_19340	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.801
KQZ61368.1	KQZ63688.1	ASD67_19260	ASD67_03800	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.801