STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ61492.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (527 aa)    
Predicted Functional Partners:
KQZ61491.1
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.669
KQZ62028.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.653
KQZ62029.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.607
KQZ61493.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.536
KQZ61490.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.491
KQZ63931.1
Peptidyl-dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.454
KQZ61494.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.440
KQZ62014.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.415
KQZ65040.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.413
KQZ65051.1
Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.409
Your Current Organism:
Sphingopyxis sp. Root1497
NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.