STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ62029.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)    
Predicted Functional Partners:
KQZ62028.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
0.913
KQZ61493.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.625
KQZ61492.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.607
KQZ61494.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.603
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
 
 0.599
KQZ61495.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.541
hutH
Catalyzes the degradation of histidine to urocanate and ammmonia; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.522
KQZ61491.1
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.421
Your Current Organism:
Sphingopyxis sp. Root1497
NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.