STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ61493.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)    
Predicted Functional Partners:
KQZ61494.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
KQZ61495.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.689
KQZ63699.1
Sphingosine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.635
KQZ62028.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.625
KQZ62029.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.625
KQZ61492.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.536
KQZ65118.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.502
KQZ62024.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.502
KQZ64784.1
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.487
KQZ64210.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.481
Your Current Organism:
Sphingopyxis sp. Root1497
NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.