STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ61742.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (796 aa)    
Predicted Functional Partners:
KQZ61741.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.986
KQZ65711.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.881
KQZ61743.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
KQZ61669.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.563
KQZ65473.1
Hemin transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.562
KQZ61856.1
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.538
KQZ64683.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.536
KQZ61858.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.536
KQZ61264.1
Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.526
KQZ61667.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.478
Your Current Organism:
Sphingopyxis sp. Root1497
NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.