STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ61794.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (425 aa)    
Predicted Functional Partners:
KQZ61793.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.840
KQZ61792.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.740
KQZ61795.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.668
KQZ61796.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.654
KQZ61798.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.654
KQZ61797.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.614
KQZ61799.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.614
KQZ61791.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.604
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.528
KQZ61801.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.521
Your Current Organism:
Sphingopyxis sp. Root1497
NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.