KQZ61849.1 protein (Sphingopyxis sp. Root1497)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

KQZ61849.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa)

Predicted Functional Partners:

KQZ65101.1

0.703

KQZ61850.1

0.674

KQZ61848.1

0.571

KQZ64716.1

0.522

KQZ61851.1

0.495

KQZ61847.1

0.480

Your Current Organism:

Sphingopyxis sp. Root1497

NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KQZ61847.1	KQZ61848.1	ASD67_22055	ASD67_22060	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.657
KQZ61847.1	KQZ61849.1	ASD67_22055	ASD67_22065	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.480
KQZ61847.1	KQZ64716.1	ASD67_22055	ASD67_09725	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.531
KQZ61847.1	KQZ65101.1	ASD67_22055	ASD67_06385	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.708
KQZ61848.1	KQZ61847.1	ASD67_22060	ASD67_22055	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.657
KQZ61848.1	KQZ61849.1	ASD67_22060	ASD67_22065	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.571
KQZ61848.1	KQZ61850.1	ASD67_22060	ASD67_22070	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.508
KQZ61848.1	KQZ64716.1	ASD67_22060	ASD67_09725	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.523
KQZ61848.1	KQZ65101.1	ASD67_22060	ASD67_06385	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.705
KQZ61849.1	KQZ61847.1	ASD67_22065	ASD67_22055	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.480
KQZ61849.1	KQZ61848.1	ASD67_22065	ASD67_22060	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.571
KQZ61849.1	KQZ61850.1	ASD67_22065	ASD67_22070	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.674
KQZ61849.1	KQZ61851.1	ASD67_22065	ASD67_22075	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.495
KQZ61849.1	KQZ64716.1	ASD67_22065	ASD67_09725	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.522
KQZ61849.1	KQZ65101.1	ASD67_22065	ASD67_06385	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.703
KQZ61850.1	KQZ61848.1	ASD67_22070	ASD67_22060	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.508
KQZ61850.1	KQZ61849.1	ASD67_22070	ASD67_22065	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.674
KQZ61850.1	KQZ61851.1	ASD67_22070	ASD67_22075	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.579
KQZ61850.1	KQZ64716.1	ASD67_22070	ASD67_09725	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.528
KQZ61850.1	KQZ65101.1	ASD67_22070	ASD67_06385	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.708