KQZ61858.1 protein (Sphingopyxis sp. Root1497)

Nodes:

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

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[Homology]

Score

KQZ61858.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)

Predicted Functional Partners:

KQZ61856.1

0.995

KQZ61857.1

0.984

ASD67_22120

0.942

KQZ61243.1

0.940

KQZ62041.1

0.940

KQZ61855.1

0.854

KQZ61642.1

0.850

ASD67_22130

0.846

KQZ61247.1

0.795

KQZ62042.1

0.795

Your Current Organism:

Sphingopyxis sp. Root1497

NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASD67_22120	ASD67_22130	ASD67_22120	ASD67_22130	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type IV secretion system protein; Part of the Type IV secretion system. Belongs to the GSP E family.	0.776
ASD67_22120	KQZ61243.1	ASD67_22120	ASD67_18515	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TrbJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
ASD67_22120	KQZ61247.1	ASD67_22120	ASD67_18540	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TraI; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
ASD67_22120	KQZ61855.1	ASD67_22120	ASD67_22095	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.516
ASD67_22120	KQZ61856.1	ASD67_22120	ASD67_22100	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
ASD67_22120	KQZ61857.1	ASD67_22120	ASD67_22105	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.920
ASD67_22120	KQZ61858.1	ASD67_22120	ASD67_22110	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.942
ASD67_22120	KQZ62041.1	ASD67_22120	ASD67_20795	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TrbJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.510
ASD67_22120	KQZ62042.1	ASD67_22120	ASD67_20815	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TrbI; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
ASD67_22130	ASD67_22120	ASD67_22130	ASD67_22120	Type IV secretion system protein; Part of the Type IV secretion system. Belongs to the GSP E family.	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
ASD67_22130	KQZ61247.1	ASD67_22130	ASD67_18540	Type IV secretion system protein; Part of the Type IV secretion system. Belongs to the GSP E family.	Conjugal transfer protein TraI; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.653
ASD67_22130	KQZ61642.1	ASD67_22130	ASD67_20810	Type IV secretion system protein; Part of the Type IV secretion system. Belongs to the GSP E family.	Conjugal transfer protein TrbG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.630
ASD67_22130	KQZ61856.1	ASD67_22130	ASD67_22100	Type IV secretion system protein; Part of the Type IV secretion system. Belongs to the GSP E family.	Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.818
ASD67_22130	KQZ61857.1	ASD67_22130	ASD67_22105	Type IV secretion system protein; Part of the Type IV secretion system. Belongs to the GSP E family.	Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.698
ASD67_22130	KQZ61858.1	ASD67_22130	ASD67_22110	Type IV secretion system protein; Part of the Type IV secretion system. Belongs to the GSP E family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.846
ASD67_22130	KQZ62042.1	ASD67_22130	ASD67_20815	Type IV secretion system protein; Part of the Type IV secretion system. Belongs to the GSP E family.	Conjugal transfer protein TrbI; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.694
KQZ61243.1	ASD67_22120	ASD67_18515	ASD67_22120	Conjugal transfer protein TrbJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
KQZ61243.1	KQZ61247.1	ASD67_18515	ASD67_18540	Conjugal transfer protein TrbJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TraI; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.919
KQZ61243.1	KQZ61642.1	ASD67_18515	ASD67_20810	Conjugal transfer protein TrbJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TrbG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.928
KQZ61243.1	KQZ61857.1	ASD67_18515	ASD67_22105	Conjugal transfer protein TrbJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.507