STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ61918.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (573 aa)    
Predicted Functional Partners:
KQZ60867.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.588
KQZ65040.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.545
KQZ62083.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.526
KQZ61916.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.519
KQZ61917.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.519
KQZ64283.1
Twin-arginine translocation pathway signal; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.511
KQZ62475.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.499
KQZ64939.1
Glucose-methanol-choline oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.446
KQZ62014.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.427
KQZ65051.1
Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.410
Your Current Organism:
Sphingopyxis sp. Root1497
NCBI taxonomy Id: 1736474
Other names: S. sp. Root1497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.