STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRB56886.1Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)    
Predicted Functional Partners:
KRB56885.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.915
KRB56884.1
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
  
 
  0.859
KRB57015.1
FemAB family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.835
KRB57332.1
Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.569
KRB57315.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.513
KRB56883.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.500
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
  0.465
KRB56861.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.457
KRB57270.1
Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.440
KRB57924.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.430
Your Current Organism:
Flavobacterium sp. Root186
NCBI taxonomy Id: 1736485
Other names: F. sp. Root186
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.