STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRB54010.1Aerotolerance regulator BatA; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)    
Predicted Functional Partners:
KRB54008.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.914
KRB54009.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.901
KRB54007.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.891
KRB59892.1
Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.885
KRB54013.1
BatD protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.855
KRB54011.1
BatB protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.841
KRB54012.1
BatC protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.837
KRB54014.1
BatE protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.762
KRB56537.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.644
KRB54507.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.625
Your Current Organism:
Flavobacterium sp. Root186
NCBI taxonomy Id: 1736485
Other names: F. sp. Root186
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.