STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRB59166.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (198 aa)    
Predicted Functional Partners:
KRB59974.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.888
KRB56818.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.788
KRB59646.1
Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.770
KRB55671.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.659
KRB57971.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.575
KRB59167.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.567
KRB59577.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.525
KRB59165.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.506
KRB54012.1
BatC protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.435
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.429
Your Current Organism:
Flavobacterium sp. Root186
NCBI taxonomy Id: 1736485
Other names: F. sp. Root186
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.