STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC23168.1HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)    
Predicted Functional Partners:
KRC19332.1
Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.796
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.774
KRC23167.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family.
       0.729
KRC23794.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
  0.728
KRC27990.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.613
KRC16867.1
FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.605
KRC12650.1
Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.605
KRC27054.1
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
0.593
KRC14678.1
D-arabinitol 4-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.558
KRC19185.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.517
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.