KRC23193.1 protein (Acidovorax sp. Root217) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

KRC23193.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)

Predicted Functional Partners:

KRC23192.1

0.655

prfC

0.645

ASE31_00770

0.610

KRC23959.1

0.429

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASE31_00770	KRC23192.1	ASE31_00770	ASE31_00775	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.722
ASE31_00770	KRC23193.1	ASE31_00770	ASE31_00780	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.610
ASE31_00770	prfC	ASE31_00770	ASE31_00785	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.	0.514
KRC23192.1	ASE31_00770	ASE31_00775	ASE31_00770	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.722
KRC23192.1	KRC23193.1	ASE31_00775	ASE31_00780	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.655
KRC23192.1	prfC	ASE31_00775	ASE31_00785	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.	0.733
KRC23193.1	ASE31_00770	ASE31_00780	ASE31_00770	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.610
KRC23193.1	KRC23192.1	ASE31_00780	ASE31_00775	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.655
KRC23193.1	KRC23959.1	ASE31_00780	ASE31_00790	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.429
KRC23193.1	prfC	ASE31_00780	ASE31_00785	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.	0.645
KRC23959.1	KRC23193.1	ASE31_00790	ASE31_00780	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.429
KRC23959.1	prfC	ASE31_00790	ASE31_00785	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.	0.513
prfC	ASE31_00770	ASE31_00785	ASE31_00770	Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.514
prfC	KRC23192.1	ASE31_00785	ASE31_00775	Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.733
prfC	KRC23193.1	ASE31_00785	ASE31_00780	Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.645
prfC	KRC23959.1	ASE31_00785	ASE31_00790	Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513