STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC23394.1C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)    
Predicted Functional Partners:
KRC23395.1
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.900
KRC23396.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.871
KRC27328.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.829
KRC19265.1
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.787
KRC14900.1
L-dehydroascorbate transporter large permease subunit; TRAP family transporter; with YiaMO is involved in the uptake of L-dehydroascorbate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.787
KRC29574.1
L-dehydroascorbate transporter large permease subunit; TRAP family transporter; with YiaMO is involved in the uptake of L-dehydroascorbate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.787
KRC27223.1
L-dehydroascorbate transporter large permease subunit; TRAP family transporter; with YiaMO is involved in the uptake of L-dehydroascorbate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.787
KRC24846.1
L-dehydroascorbate transporter large permease subunit; TRAP family transporter; with YiaMO is involved in the uptake of L-dehydroascorbate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.787
KRC14951.1
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.786
KRC28057.1
C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.784
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.