STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC23418.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (108 aa)    
Predicted Functional Partners:
ASE31_25610
Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.931
KRC17805.1
ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.869
KRC23297.1
Calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.866
KRC23601.1
Calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.866
KRC24902.1
Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.863
KRC23336.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.844
KRC23642.1
Cellulose synthase; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
    
 0.844
KRC11754.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.844
KRC27980.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.844
KRC27185.1
Lysine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.839
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.