STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC23531.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (839 aa)    
Predicted Functional Partners:
KRC19244.1
Arylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.786
macB
Macrolide transporter; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.666
KRC23824.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.654
KRC24035.1
GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.644
KRC23532.1
Globin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.643
KRC23827.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.548
KRC23530.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.496
KRC19243.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.483
fdhD-2
Formate dehydrogenase family accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
       0.465
lolD
Lipoprotein ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
  
 
 0.456
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.