KRC23546.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

KRC23546.1

GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (472 aa)

Predicted Functional Partners:

KRC14858.1

0.648

KRC23547.1

0.530

KRC17481.1

0.448

KRC27059.1

0.442

KRC28173.1

0.439

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC14858.1	KRC17481.1	ASE31_08950	ASE31_30160	Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.648
KRC14858.1	KRC23546.1	ASE31_08950	ASE31_02810	Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.648
KRC14858.1	KRC27059.1	ASE31_08950	ASE31_16635	Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.648
KRC14858.1	KRC28173.1	ASE31_08950	ASE31_13240	Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.648
KRC17481.1	KRC14858.1	ASE31_30160	ASE31_08950	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.648
KRC17481.1	KRC23546.1	ASE31_30160	ASE31_02810	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
KRC23546.1	KRC14858.1	ASE31_02810	ASE31_08950	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.648
KRC23546.1	KRC17481.1	ASE31_02810	ASE31_30160	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
KRC23546.1	KRC23547.1	ASE31_02810	ASE31_02815	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxy-3-methylglutaryl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HMG-CoA reductase family.	0.530
KRC23546.1	KRC27059.1	ASE31_02810	ASE31_16635	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.442
KRC23546.1	KRC28173.1	ASE31_02810	ASE31_13240	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.439
KRC23547.1	KRC23546.1	ASE31_02815	ASE31_02810	3-hydroxy-3-methylglutaryl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HMG-CoA reductase family.	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.530
KRC27059.1	KRC14858.1	ASE31_16635	ASE31_08950	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.648
KRC27059.1	KRC23546.1	ASE31_16635	ASE31_02810	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.442
KRC28173.1	KRC14858.1	ASE31_13240	ASE31_08950	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.648
KRC28173.1	KRC23546.1	ASE31_13240	ASE31_02810	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.439