KRC24005.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

Coexpression

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[Homology]

Score

KRC24005.1

ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)

Predicted Functional Partners:

KRC24006.1

0.952

KRC12881.1

0.940

KRC23571.1

0.905

KRC23572.1

0.708

KRC12882.1

0.566

KRC20336.1

0.545

KRC12910.1

0.537

KRC29583.1

0.518

KRC30616.1

0.479

KRC11806.1

0.477

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC11806.1	KRC12910.1	ASE31_11480	ASE31_10030	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.	0.969
KRC11806.1	KRC20336.1	ASE31_11480	ASE31_25480	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.731
KRC11806.1	KRC24005.1	ASE31_11480	ASE31_02950	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.477
KRC12881.1	KRC12882.1	ASE31_09880	ASE31_09885	Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalamin biosynthesis protein CobN; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
KRC12881.1	KRC24005.1	ASE31_09880	ASE31_02950	Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.940
KRC12882.1	KRC12881.1	ASE31_09885	ASE31_09880	Cobalamin biosynthesis protein CobN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
KRC12882.1	KRC24005.1	ASE31_09885	ASE31_02950	Cobalamin biosynthesis protein CobN; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.566
KRC12910.1	KRC11806.1	ASE31_10030	ASE31_11480	Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969
KRC12910.1	KRC20336.1	ASE31_10030	ASE31_25480	Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.823
KRC12910.1	KRC24005.1	ASE31_10030	ASE31_02950	Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.537
KRC20336.1	KRC11806.1	ASE31_25480	ASE31_11480	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.731
KRC20336.1	KRC12910.1	ASE31_25480	ASE31_10030	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.	0.823
KRC20336.1	KRC24005.1	ASE31_25480	ASE31_02950	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.545
KRC23571.1	KRC23572.1	ASE31_02960	ASE31_02965	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.663
KRC23571.1	KRC24005.1	ASE31_02960	ASE31_02950	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
KRC23571.1	KRC24006.1	ASE31_02960	ASE31_02955	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
KRC23572.1	KRC23571.1	ASE31_02965	ASE31_02960	Peptidase S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.663
KRC23572.1	KRC24005.1	ASE31_02965	ASE31_02950	Peptidase S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.708
KRC23572.1	KRC24006.1	ASE31_02965	ASE31_02955	Peptidase S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.793
KRC24005.1	KRC11806.1	ASE31_02950	ASE31_11480	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.477