KRC23571.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Gene Fusion

Cooccurrence

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[Homology]

Score

KRC23571.1

ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)

Predicted Functional Partners:

KRC24006.1

0.949

KRC24005.1

0.905

KRC21373.1

0.786

KRC23572.1

0.663

KRC29535.1

0.637

KRC29536.1

0.499

KRC24007.1

0.472

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC21373.1	KRC23571.1	ASE31_23170	ASE31_02960	Lysine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.786
KRC23571.1	KRC21373.1	ASE31_02960	ASE31_23170	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lysine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.786
KRC23571.1	KRC23572.1	ASE31_02960	ASE31_02965	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.663
KRC23571.1	KRC24005.1	ASE31_02960	ASE31_02950	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
KRC23571.1	KRC24006.1	ASE31_02960	ASE31_02955	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
KRC23571.1	KRC24007.1	ASE31_02960	ASE31_02970	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNAase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.472
KRC23571.1	KRC29535.1	ASE31_02960	ASE31_12660	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.637
KRC23571.1	KRC29536.1	ASE31_02960	ASE31_12665	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.499
KRC23572.1	KRC23571.1	ASE31_02965	ASE31_02960	Peptidase S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.663
KRC23572.1	KRC24005.1	ASE31_02965	ASE31_02950	Peptidase S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.708
KRC23572.1	KRC24006.1	ASE31_02965	ASE31_02955	Peptidase S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.793
KRC23572.1	KRC24007.1	ASE31_02965	ASE31_02970	Peptidase S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNAase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.572
KRC24005.1	KRC23571.1	ASE31_02950	ASE31_02960	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
KRC24005.1	KRC23572.1	ASE31_02950	ASE31_02965	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.708
KRC24005.1	KRC24006.1	ASE31_02950	ASE31_02955	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.952
KRC24005.1	KRC24007.1	ASE31_02950	ASE31_02970	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNAase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.409
KRC24006.1	KRC23571.1	ASE31_02955	ASE31_02960	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
KRC24006.1	KRC23572.1	ASE31_02955	ASE31_02965	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.793
KRC24006.1	KRC24005.1	ASE31_02955	ASE31_02950	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.952
KRC24006.1	KRC24007.1	ASE31_02955	ASE31_02970	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNAase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.442