KRC23656.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

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[Homology]

Score

KRC23656.1

Iron-regulated protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)

Predicted Functional Partners:

KRC23655.1

0.977

KRC23654.1

0.974

KRC23653.1

0.954

KRC23951.1

0.930

KRC15020.1

0.860

KRC19134.1

0.775

KRC23932.1

0.726

KRC23898.1

0.602

KRC23931.1

0.590

KRC19137.1

0.573

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC15020.1	KRC19137.1	ASE31_08790	ASE31_05755	Iron deficiency-induced protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.525
KRC15020.1	KRC23655.1	ASE31_08790	ASE31_03425	Iron deficiency-induced protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thiol oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.427
KRC15020.1	KRC23656.1	ASE31_08790	ASE31_03430	Iron deficiency-induced protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron-regulated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.860
KRC15020.1	KRC23932.1	ASE31_08790	ASE31_04980	Iron deficiency-induced protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.712
KRC15020.1	KRC23951.1	ASE31_08790	ASE31_05100	Iron deficiency-induced protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thiol oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.415
KRC19134.1	KRC19137.1	ASE31_05740	ASE31_05755	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.684
KRC19134.1	KRC23654.1	ASE31_05740	ASE31_03420	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
KRC19134.1	KRC23655.1	ASE31_05740	ASE31_03425	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thiol oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.414
KRC19134.1	KRC23656.1	ASE31_05740	ASE31_03430	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron-regulated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.775
KRC19134.1	KRC23951.1	ASE31_05740	ASE31_05100	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thiol oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.414
KRC19137.1	KRC15020.1	ASE31_05755	ASE31_08790	Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron deficiency-induced protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.525
KRC19137.1	KRC19134.1	ASE31_05755	ASE31_05740	Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.684
KRC19137.1	KRC23655.1	ASE31_05755	ASE31_03425	Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thiol oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
KRC19137.1	KRC23656.1	ASE31_05755	ASE31_03430	Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron-regulated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.573
KRC19137.1	KRC23931.1	ASE31_05755	ASE31_04975	Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.465
KRC19137.1	KRC23932.1	ASE31_05755	ASE31_04980	Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.482
KRC19137.1	KRC23951.1	ASE31_05755	ASE31_05100	Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thiol oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
KRC23653.1	KRC23654.1	ASE31_03415	ASE31_03420	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
KRC23653.1	KRC23655.1	ASE31_03415	ASE31_03425	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thiol oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
KRC23653.1	KRC23656.1	ASE31_03415	ASE31_03430	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron-regulated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.954