KRC23676.1 protein (Acidovorax sp. Root217) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

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[Homology]

Score

KRC23676.1

GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)

Predicted Functional Partners:

KRC19042.1

0.632

KRC29502.1

0.632

KRC29503.1

0.632

KRC29504.1

0.632

KRC29505.1

0.632

KRC29506.1

0.632

KRC21455.1

0.632

KRC20108.1

0.632

KRC30679.1

0.570

KRC30688.1

0.570

Your Current Organism:

Acidovorax sp. Root217

NCBI taxonomy Id: 1736492
Other names: A. sp. Root217

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRC19042.1	KRC23676.1	ASE31_05190	ASE31_03535	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.632
KRC20108.1	KRC23676.1	ASE31_26405	ASE31_03535	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.632
KRC21455.1	KRC23676.1	ASE31_23630	ASE31_03535	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.632
KRC23676.1	KRC19042.1	ASE31_03535	ASE31_05190	GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.632
KRC23676.1	KRC20108.1	ASE31_03535	ASE31_26405	GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.632
KRC23676.1	KRC21455.1	ASE31_03535	ASE31_23630	GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.632
KRC23676.1	KRC29502.1	ASE31_03535	ASE31_12460	GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.632
KRC23676.1	KRC29503.1	ASE31_03535	ASE31_12465	GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.632
KRC23676.1	KRC29504.1	ASE31_03535	ASE31_12470	GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.632
KRC23676.1	KRC29505.1	ASE31_03535	ASE31_12475	GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.632
KRC23676.1	KRC29506.1	ASE31_03535	ASE31_12480	GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.632
KRC23676.1	KRC30679.1	ASE31_03535	ASE31_00405	GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.570
KRC23676.1	KRC30688.1	ASE31_03535	ASE31_00450	GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.570
KRC29502.1	KRC23676.1	ASE31_12460	ASE31_03535	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.632
KRC29502.1	KRC29503.1	ASE31_12460	ASE31_12465	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.705
KRC29503.1	KRC23676.1	ASE31_12465	ASE31_03535	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.632
KRC29503.1	KRC29502.1	ASE31_12465	ASE31_12460	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.705
KRC29504.1	KRC23676.1	ASE31_12470	ASE31_03535	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.632
KRC29504.1	KRC29505.1	ASE31_12470	ASE31_12475	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.509
KRC29504.1	KRC29506.1	ASE31_12470	ASE31_12480	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.419