STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC24016.1Alpha-2-macroglobulin; Derived by automated computational analysis using gene prediction method: Protein Homology. (1986 aa)    
Predicted Functional Partners:
KRC24017.1
Penicillin-binding protein 1C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.929
KRC27185.1
Lysine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.834
KRC11869.1
Zinc carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.784
KRC20339.1
Peptidase M14; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.745
nrdR
NrdR family transcriptional regulator; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
    
   0.736
KRC17866.1
Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.686
KRC23679.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.648
KRC24013.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.638
KRC23847.1
Acetyl esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.638
KRC24041.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.638
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.