STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRC24030.1N-terminal cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)    
Predicted Functional Partners:
KRC24029.1
Pilus assembly protein PilC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.971
KRC23796.1
Pilus assembly protein PilV; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.966
KRC23795.1
Pilus assembly protein PilX; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.958
KRC24028.1
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.851
KRC23797.1
General secretion pathway protein GspH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.851
KRC25692.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.660
KRC23975.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.602
KRC27209.1
N-terminal cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the N-Me-Phe pilin family.
  
  
 0.602
KRC15018.1
Molybdopterin-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.592
KRC12835.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.550
Your Current Organism:
Acidovorax sp. Root217
NCBI taxonomy Id: 1736492
Other names: A. sp. Root217
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.